USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

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Searching in 'USC-OGP 2-DE database' for entry matching: SSU72_HUMAN USC-OGP 2-DE database:  SSU72_HUMAN SSU72_HUMAN General information about the entry View entry in simple text format Entry name SSU72_HUMAN Primary accession number Q9NP77 Secondary accession number(s) Q9BZS6 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase SSU72; Short=CTD phosphatase SSU72; EC=3.1.3.16;. Gene name Name=SSU72 ORFNames=HSPC182, PNAS-120 Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1256: pI=5.39; Mw=30456 Cross-references UniProtKB/Swiss-Prot Q9NP77; SSU72_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name SSU72_HUMAN Primary accession number Q9NP77 Secondary accession number(s) Q9BZS6 Q9H933 Sequence was last modified on  October 1, 2000 (version 1) Annotations were last modified on  March 15, 2017 (version 128) Name and origin of the protein Description RecName: Full=RNA polymerase II subunit A C-terminal domain phosphatase SSU72; Short=CTD phosphatase SSU72; EC=3.1.3.16; Gene name Name=SSU72 ORFNames=HSPC182, PNAS-120 Encoded on Name=SSU72; ORFNames=HSPC182, PNAS-120 Keywords 3D-structure; Alternative splicing; Coiled coil; Complete proteome; Cytoplasm; Hydrolase; mRNA processing; Nucleus; Protein phosphatase; Reference proteome. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL AF161530; AAF29145.1; -; mRNA EMBL AF277178; AAK07538.1; -; mRNA EMBL AJ276409; CAC81713.1; -; mRNA EMBL AK001809; BAA91921.1; -; mRNA EMBL AK023110; BAB14410.1; -; mRNA EMBL AK291324; BAF84013.1; -; mRNA EMBL AL645728; CAI22945.1; -; Genomic_DNA EMBL AL645728; CAI22947.1; -; Genomic_DNA EMBL CH471183; EAW56182.1; -; Genomic_DNA EMBL CH471183; EAW56183.1; -; Genomic_DNA EMBL BC008070; AAH08070.1; -; mRNA CCDS CCDS32.1; -. [Q9NP77-1]; . RefSeq NP_054907.1; NM_014188.2. [Q9NP77-1]; . UniGene Hs.30026; -; . UniGene Hs.549751; -; . UniGene Hs.732583; -; . PDB 3O2Q; X-ray; 2.40 A; B/E=1-194 PDB 3O2S; X-ray; 2.50 A; B=1-194 PDB 4H3H; X-ray; 2.20 A; B/E=1-194 PDB 4H3K; X-ray; 2.00 A; B/E=1-194 PDBsum 3O2Q; -; . PDBsum 3O2S; -; . PDBsum 4H3H; -; . PDBsum 4H3K; -; . ProteinModelPortal Q9NP77; -; . SMR Q9NP77; -; . BioGrid 118869; 31; . DIP DIP-53666N; -; . IntAct Q9NP77; 8; . MINT MINT-3071462; -; . STRING 9606.ENSP00000291386; -; . BindingDB Q9NP77; -; . ChEMBL CHEMBL3317331; -; . DEPOD Q9NP77; -; . iPTMnet Q9NP77; -; . PhosphoSitePlus Q9NP77; -; . BioMuta SSU72; -; . DMDM 74752877; -; . EPD Q9NP77; -; . MaxQB Q9NP77; -; . PaxDb Q9NP77; -; . PeptideAtlas Q9NP77; -; . PRIDE Q9NP77; -; . DNASU 29101; -; . Ensembl ENST00000291386; ENSP00000291386; ENSG00000160075. [Q9NP77-1]; . Ensembl ENST00000359060; ENSP00000351955; ENSG00000160075. [Q9NP77-2]; . GeneID 29101; -; . KEGG hsa:29101; -; . UCSC uc001agd.4; human. [Q9NP77-1]; . CTD 29101; -; . DisGeNET 29101; -; . GeneCards SSU72; -; . HGNC HGNC:25016; SSU72; . HPA HPA069290; -; . HPA HPA070604; -; . neXtProt NX_Q9NP77; -; . OpenTargets ENSG00000160075; -; . PharmGKB PA142670866; -; . eggNOG KOG2424; Eukaryota; . eggNOG COG5211; LUCA; . GeneTree ENSGT00390000010165; -; . HOGENOM HOG000183445; -; . HOVERGEN HBG059831; -; . InParanoid Q9NP77; -; . KO K15544; -; . OMA NRPFLHT; -; . OrthoDB EOG091G0MLX; -; . PhylomeDB Q9NP77; -; . TreeFam TF300194; -; . SIGNOR Q9NP77; -; . ChiTaRS SSU72; human; . EvolutionaryTrace Q9NP77; -; . GenomeRNAi 29101; -; . PRO PR:Q9NP77; -; . Proteomes UP000005640; Chromosome 1; . Bgee ENSG00000160075; -; . CleanEx HS_SSU72; -; . Genevisible Q9NP77; HS; . GO GO:0005829; C:cytosol; IDA:HPA; . GO GO:0005847; C:mRNA cleavage and polyadenylation specificity factor complex; IBA:GO_Central; . GO GO:0005654; C:nucleoplasm; IDA:HPA; . GO GO:0008420; F:CTD phosphatase activity; IDA:UniProtKB; . GO GO:0070940; P:dephosphorylation of RNA polymerase II C-terminal domain; IDA:UniProtKB; . GO GO:0006378; P:mRNA polyadenylation; IMP:UniProtKB; . GO GO:0006369; P:termination of RNA polymerase II transcription; IBA:GO_Central; . InterPro IPR006811; RNA_pol_II_suA; . PANTHER PTHR20383; PTHR20383; 1; . Pfam PF04722; Ssu72; 1; .

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